1) Metabolic
- Fuel (e.g., glucose, glycogen)2) Structural
- Biosynthetic precursors (e.g., amino acids, nucleotides and nucleic acids)
- structural glycans (e.g., chitin, cellulose)
- glycoconjugates (proteo- and peptidoglycans, glycoproteins)
Carbohydrate diversity
Monosaccharides: e.g., glucose, mannose, fructose, etc.
Oligosaccharides (2-~ 20): e.g., sucrose, "CHO" in glycoproteins
Polysaccharides (homo- and hetero-glycans): e.g., amylose, glycogen, cellulose, chitin
Synthesis is "enzymatic":
1) Unlike proteins and nucleic acids, sequence + length of polymers is not template-dependent/genetically-determined2) Polymers may be linear (e.g., amylose) or branched (amylopectin, glycogen)
Monosaccharides
Basic formula" = (CH2O)n
Structural diversity is based on:
1) Carbon number:
- trioses (Glyceraldehyde, Dihydroxyacetone)2) Position of "anomeric" (carbonyl) carbon: Aldoses (terminal) and Ketoses (internal)
- tetroses (e.g., erythrose, threose)
- pentoses (Ribose, Ribulose, arabinose, etc.)
- hexoses (Glucose, Mannose, Galactose, Fructose)
3) Stereoisomers: (2)n
Ring formation
Aldoses: aldehyde + alcohol = hemiacetal
Ketoses: ketone + alcohol = hemiketal
Furanose: five-membered ring (e.g, ribofuranose)
Pyranose: six-membered ring (e.g, glucopyranose,
ribopyranose)
OH oxygen is incorporated into ring
C=O oxygen becomes OH that projects from
anomeric carbon
The "C=O" carbon becomes chiral in the
ring: -OH group is either down (the anomer) or up ( anomer)
As long as it does not participate
in further covalent linkages (e.g., to other sugars), the anomeric
carbon is subject to:
Converting between Fischer and Haworth
projections:
1) D means "down" for -OH: groups on right of Fisher projection point down in Haworth projection
2) D means up for carbon: in cases where C6 is not incorporated into the ring, it will project above the ring in "D" sugars
Conformers
Furanoses:
Twist (3 atoms are co-planar)Pyranoses: Chair (most stable) vs. Boat
Envelope (4 coplanar atoms)
Subsituents are either axial or equatorial:- more stable when bulky groups are equatorial
- in chair conformation of -glucose (-D-glucopyranose), all non-H groups can be equatorial
Sugar derivatives
Sugar phosphates (esters)
Deoxy sugars
Amino sugars (e.g., glucosamine, GlcNAc)
Sugar alcohols (e.g., inositol, ribitol)
Sugar acids (e.g., gluconate, glucuronate)
Glycosidic bonds
Condensation reaction (with elimination of water) involving the anomeric carbon
Anomeric carbon becomes fixed (alpha or
beta) and is no longer subject to oxidation (i.e.,
is "non-reducing")
Allow polymerizaton of sugars: hemi-acetal/hemi-ketal
becomes linked to -OH of another sugar
Important Polysaccharides
Glucose polymers (homoglycans):
1) Amylose: alpha1->4 links (linear)Chitin: homoglycan of GlcNAc in beta 1->4 linkages2) Glycogen and amylopectin: alpha1->4 links with 1->6 branchpoints (more frequent in glycogen than amylopectin)
(Key digestive enzymes:3) Cellulose: Beta1->4 links
alpha-amylase is a digestive endoglycosidase that hydrolyzes alpha1->4 links between internal glucose molecules
beta amylase is an exoglycosidase of plants that cleaves maltose from non-reducing ends
Cleavage of alpha 1->6 links requires "debranching enzyme")Resistant to mammalian enzymes: indigestible
Interchain H-bonding stabilizes strong, insoluble fibrils
Glycosaminoglycans
e.g., Hyaluronic acid: glucuronic acid and GlcNAc, beta1->3 and beta 1->4 linksGAGs + core proteins = proteoglycansIn addition to an amino sugar and (often) an alduronic acid, some other glycosaminoglycans (e.g., keratan sulfate, chondroitin sulfate) have additional (charged) sulfates
Highly hydrated: important for tensile and compressile strength of cartilage and other connective tissue